CDS

Accession Number TCMCG011C17113
gbkey CDS
Protein Id XP_021902215.1
Location join(638046..638108,638851..639020,639330..639440,639734..639801,640419..640489,640581..640625,640713..640772,641945..642005,642099..642211,642436..642551,644039..644137,644278..644353,644549..644637,645712..645778,645897..645995,646263..646344,655187..655254,656319..656456)
Gene LOC110817812
GeneID 110817812
Organism Carica papaya

Protein

Length 531aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA264084
db_source XM_022046523.1
Definition splicing factor U2af large subunit B-like isoform X3 [Carica papaya]

EGGNOG-MAPPER Annotation

COG_category A
Description U2 snRNP auxiliary factor large subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12837        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000243        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0008187        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030628        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0089701        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGCGCACGAATCACCATACAACGCCAATGGTGAAGACGATAAGTCCTCCCAACAGAAGCAAAATTCTCATGGCTGGACTCGTGAGAGACCTGGGACTCGAGAGCGAGGTCGAGAGAGGGAAAGGGACCGAGACCGCCATTTTAGGGACCACAAAGCCAGGGGCTTGAGAGATCATGGAGGCAGGGGCAAGTATGATAACTATAGCTCACGGAAACGAGATTACTTCAGGAAATGCGAATACAGTCGAGATAAAGAAAAGCAGCATAGACACAGATCACGTTCTCGCTCCAGGGATAGATTTGGGAATCGATCCATATCACCCTCGCATTCTCCAAGAAGCAAGCGGAGAAGTGGTTTTGACATGGCTCCACCAGTTGGAGCCATTCTGCCTGGTGCTGCTGTTCCAGGGCAATTGCCTGCTGTTCCTCAAACAGTACCAGGAGTTGCACAAAATATGTTGCCTTTTGGAACAGCCCAGGTGGGAGCTCTTCCCCTGATGCCAGCCCAATCAATGACTCAGCAGGCAACAAGGCATGCTCGTAGGGTATACGTCGGAGGTCTACCCCCCATGGCAAATGAGCAGGCAATTGCAACATTTTTTAGCTGTGTTATGGCTGCAATTGGAGGAAATTCGGCTGGTCCTGGTGATGCAGTAGTTAATGTGTACATTAATCATGAGAAGAAATTTGCATTTGTTGAGATGAGAACTGTTGAAGAAGCTAGTAATGCAATGGCATTAGATGGGATTATGTTTGAGGGTGTTGCAGTAAGGGTCCGGCGTCCTACAGATTACAATCCAGCATTAGCTGCAGCCCTTGGCCCAAGCCAACCAAGTCCTCACCTTAATTTAGCTGCTGTTGGAATCACCCCCGGAGCAATTGCTGGAGCAGAAGGACCTGACCGAATCTTTGTGGGTGGATTGCCATATTACTTTACTGAAGCACAAATAAGAGAGTTACTAGAATCTTTTGGCCCTCTCCGTGGCTTTGACCTTGTTAAGGATAAAGATACAGGGAATTCTAAAGGATATGGTTTTTGTGTTTATAAGGATCCAGCAGTGATAGATGTTGCATGTGCTGCGCTTAACGGGTTGAAAATGGGTGATAAGACACTAACTGTTCGTCGTGCAACCATAAGCACTGGGCAGTCCAAGTCAGAACAGGAAAATATATTAGCTCAGGCACAGCAGCATATTTCAATGCAGAAGATGGCCTTGCAAGTTGGAGGTTTTAGTCTCTCTGGAGTCGAAACTTCACCTTCAGTATTTGCAGAAGCTCCTACTAAAGTTTTGTGCTTAACTGAGGCGATTACGGCCGATACGTTAAGAGATGATGAGGAATATGAAGAAATACTTGAAGACATGAGGGAAGAATGTAGCAAGTTTGGAACCTTGTTGAATGTTGTTATTCCTCGCCCAAATCCAAATGGAGAGCAGATGCCAGGTGTTGGAAAGGTGTTCTTGGAATACTCGGATACGAGTGCTTGTGCAAACGCAAGGAATTTGCTAAGTGGGAGGAAATTTGGAGGGAATGTTGTGATTGCAGTTTATTACCCGGAAGACAAGTATTACAGCAGAGATTATAGTGCATAG
Protein:  
MSAHESPYNANGEDDKSSQQKQNSHGWTRERPGTRERGRERERDRDRHFRDHKARGLRDHGGRGKYDNYSSRKRDYFRKCEYSRDKEKQHRHRSRSRSRDRFGNRSISPSHSPRSKRRSGFDMAPPVGAILPGAAVPGQLPAVPQTVPGVAQNMLPFGTAQVGALPLMPAQSMTQQATRHARRVYVGGLPPMANEQAIATFFSCVMAAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIMFEGVAVRVRRPTDYNPALAAALGPSQPSPHLNLAAVGITPGAIAGAEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDKDTGNSKGYGFCVYKDPAVIDVACAALNGLKMGDKTLTVRRATISTGQSKSEQENILAQAQQHISMQKMALQVGGFSLSGVETSPSVFAEAPTKVLCLTEAITADTLRDDEEYEEILEDMREECSKFGTLLNVVIPRPNPNGEQMPGVGKVFLEYSDTSACANARNLLSGRKFGGNVVIAVYYPEDKYYSRDYSA